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ERX9963636: NextSeq 500 paired end sequencing; Raw reads: DTU_2020_1000702_1_SI_FRA_VAL_005
1 ILLUMINA (NextSeq 500) run: 615,365 spots, 181.1M bases, 80.7Mb downloads

Design: unspecified
Submitted by: Centre for Genomic Epidemiology, National Food Institute, Technical University of Denmark (DTU), Denmark (Centre for Genomic Epidemiology, National Food Ins)
Study: Two weeks in the World 2020
show Abstracthide Abstract
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from select bioinformatic analysis, such as species prediction and identification of acquired resistance genes. The dataset is browsable and interactable through a web-application. This is created and shared according to the FAIR principles and has large reuse potential within the research fields of clinical microbiology and global health.
Sample: DTU_2020_1000702_1_SI_FRA_VAL_005
SAMEA111504495 • ERS13616857 • All experiments • All runs
Library:
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 615,365 spots, 181.1M bases, 80.7Mb
Run# of Spots# of BasesSizePublished
ERR10437739615,365181.1M80.7Mb2022-11-01

ID:
25068220

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